Circular RNA (circRNA) in Alzheimer's disease (AD)

WJ Lukiw - Frontiers in genetics, 2013 - frontiersin.org
Frontiers in genetics, 2013frontiersin.org
Circular RNAs (circRNAs) are a naturally occurring family of noncoding RNAs (ncRNAs)
highly represented in the eukaryotic transcriptome. Recently characterized, traditional
methods of RNA detection and analysis requiring a free 5 or 3 ribonucleotide terminus may
have significantly underestimated circRNA abundance and significance in eukaryotic cells
(Salzman et al., 2012; Wilusz and Sharp, 2013; unpublished observations). Intrinsically
resistant to exonucleolytic RNA decay, circRNAs appear to be enriched in mammalian brain …
Circular RNAs (circRNAs) are a naturally occurring family of noncoding RNAs (ncRNAs) highly represented in the eukaryotic transcriptome. Recently characterized, traditional methods of RNA detection and analysis requiring a free 5 or 3 ribonucleotide terminus may have significantly underestimated circRNA abundance and significance in eukaryotic cells (Salzman et al., 2012; Wilusz and Sharp, 2013; unpublished observations). Intrinsically resistant to exonucleolytic RNA decay, circRNAs appear to be enriched in mammalian brain tissues (Hansen et al., 2013; Memczak et al., 2013). Interestingly, specific ncRNAs such as the evolutionary ancient microRNA-7 (miRNA-7; chr 9q21. 32; an important post-transcriptional regulator of human brain gene expression), are not only highly abundant in human brain, but are also associated with a circRNA for miRNA-7 (ciRS-7), in the same tissues; ciRS-7 contains multiple, tandem anti-miRNA-7 sequences (Burmistrova et al., 2007; Hansen et al., 2013; Lukiw et al., 2013). ciRS-7 thereby acts as a kind of endogenous, competing, anti-complementary miRNA “sponge” to adsorb, and hence quench, normal miRNA-7 functions. Using Northern blot hybridization techniques and the circularity-sensitive circRNA probe RNaseR we here provide initial evidence of a mis-regulated miRNA-7-circRNA system in the sporadic Alzheimer’s disease (AD) hippocampal CA1 region (Figure 1). Deficits in ciRS-7, and ciRS-7 “sponging activities” might be expected to increase ambient miRNA-7 levels in AD-affected brain cells, as is observed, to ultimately
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